DOKK / manpages / debian 12 / ruby-rgfa / gfadiff.1.en
GFADIFF(1)   GFADIFF(1)

gfadiff - compare two GFA files

gfadiff [-h] [-s] [-l] [-c] [-p] [-i] [-script] <gfa1> <gfa2>

If a combination of -h,-s,-l,-c and/or -p is specified, then only record of the specified type [h=headers, s=segments, l=links, c=containments, p=paths] are compared. (default: -h -s -l -c -p)

-i

output message if identical

-script

create Ruby script to transform gfa1 into gfa2

rgfa-simdebruijn(1), rgfa-findcrispr(1), rgfa-mergelinear(1)

Please report bugs to the RGFA issue tracker: <https://github.com/ggonnella/rgfa/issues>