salmon - highly-accurate, transcript-level quantification
estimates from RNA-seq data
salmon v1.10.1
- salmon -v|--version or salmon -c|--cite or salmon
[--no-version-check] <COMMAND> [-h | options]
- index
- : create a salmon index
- quant
- : quantify a sample
- alevin
- : single cell analysis
- swim
- : perform super-secret operation
- quantmerge : merge multiple quantifications into a single file