NAME

vcf-shuffle-cols - reorder columns

SYNOPSIS

vcf-shuffle-cols [OPTIONS] -t template.vcf.gz file.vcf.gz > out.vcf

DESCRIPTION

About: Reorder columns to match the order in the template VCF.

OPTIONS

-t, --template <file>

The file with the correct order of the columns.

-h, -?, --help

This help message.