| Bio::Tools::Profile(3pm) | User Contributed Perl Documentation | Bio::Tools::Profile(3pm) |
Bio::Tools::Profile - parse Profile output
use Bio::Tools::Profile;
my $profile_parser = Bio::Tools::Profile->new(-fh =>$filehandle );
while( my $profile_feat = $profile_parser->next_result ) {
push @profile_feat, $profile_feat;
}
Parser for Profile output
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The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
Title : new
Usage : my $obj = Bio::Tools::Profile->new();
Function: Builds a new Bio::Tools::Profile object
Returns : Bio::Tools::Profile
Args : -filename
-fh ($filehandle)
Title : next_result Usage : my $feat = $profile_parser->next_result Function: Get the next result set from parser data Returns : L<Bio::SeqFeature::FeaturePair> Args : none
Title : create_feature Usage : my $feat= $profile_parser->create_feature($feature) Function: creates a Bio::SeqFeature::FeaturePair object Returns : L<Bio::SeqFeature::FeaturePair> Args :
| 2020-10-28 | perl v5.30.3 |